Submissions:GO Top - Revision history

EnricoDaga at 14:50, 12 March 2010

2010-03-12T14:50:33Z

EnricoDaga at 14:49, 12 March 2010

2010-03-12T14:49:52Z

EnricoDaga at 12:54, 8 March 2010

2010-03-08T12:54:02Z

EnricoDaga: Text replace - '{{Reviews about me}}' to '{{Reviews about me}}{{Modeling issues about me}}'

2010-03-01T13:20:49Z

Text replace - '{{Reviews about me}}' to '{{Reviews about me}}{{Modeling issues about me}}'

EnricoDaga: Text replace - 'Include Image' to 'Graphical representation'

2010-03-01T12:36:36Z

Text replace - 'Include Image' to 'Graphical representation'

Admin: Text replace - 'SubmittedBy=User:' to 'SubmittedBy='

2009-03-10T15:28:41Z

Text replace - 'SubmittedBy=User:' to 'SubmittedBy='

Admin at 17:38, 9 December 2008

2008-12-09T17:38:35Z

Admin at 12:22, 4 June 2008

2008-06-04T12:22:20Z

AldoGangemi: New page: {{Include Image |ImageName=Gotop.jpg }} {{Content OP Proposal Template |SubmittedBy=User:AldoGangemi |Name=Gene Ontology Top Level |Intent=To represent types of gene-related entities and t...

2008-04-30T00:54:14Z

New page: {{Include Image |ImageName=Gotop.jpg }} {{Content OP Proposal Template |SubmittedBy=User:AldoGangemi |Name=Gene Ontology Top Level |Intent=To represent types of gene-related entities and t...

New page

{{Include Image
|ImageName=Gotop.jpg
}}
{{Content OP Proposal Template
|SubmittedBy=User:AldoGangemi
|Name=Gene Ontology Top Level
|Intent=To represent types of gene-related entities and their parts.
|Domain=Community:Biology
|CompetencyQuestion=What are the possible most general supertypes for any type from the gene-related domain?, What entity is part of another entity in the gene-related domain?
|ReusableOWLBuildingBlock=http://www.ontologydesignpatterns.org/cp/owl/gotop.owl
|Consequences=It allows to categorize gene-related types into three main types.
It allows to represent parts of gene-related entities (transitively).
It does not allow to represent the relationships between entities of different types.
It does not say anything about disjointness of categories.
|Scenario=A 'template for synthesis of G-rich strand of telomere DNA activity' must be part of a 'telomerase activity', All 'templates for synthesis of G-rich strand of telomere DNA activity' are 'molecular functions'
|WebReference=http://www.geneontology.org
|ExtractedFrom=http://purl.org/obo/owl/gene_ontology_edit
|ReengineeredFrom=http://purl.org/obo/owl/gene_ontology_edit
|RelatedCP=Submissions:PartOf
}}
{{Element list header}}
{{Has Element Template
|HasElement=CellularComponent
}}
{{Has Element Template
|HasElement=MolecularFunction
}}
{{Has Element Template
|HasElement=BiologicalProcess
}}
{{Has Element Template
|HasElement=partOf
}}
{{Reviews about me}}
This pattern is peculiar to the biomolecular domain, where types of entities, rather than specific instances, are the main focus of interest. As a result, the Gene Ontology, based on this top-level categories, is a huge TBox.
[[Submissions:PartOf| Part of]] can have this pattern as a specialization, if the three gene-related categories are considered as owl:subClassOf [[Submissions:PartOf/Entity| Entity]].

@@ Line 1: / Line 1: @@
 {{Content_OP_Proposal_toolbar}}
-{{Include Image
+{{Graphical representation
 |ImageName=Gotop.jpg
 }}

@@ Line 19: / Line 19: @@
 |ExtractedFrom=http://purl.org/obo/owl/gene_ontology_edit
 |ReengineeredFrom=http://purl.org/obo/owl/gene_ontology_edit
-|RelatedCP=Submissions:PartOf
+|RelatedCP=PartOf
 }}
 {{Element list header}}

@@ Line 17: / Line 17: @@
 It does not say anything about disjointness of categories.
 |Scenario=A 'template for synthesis of G-rich strand of telomere DNA activity' must be part of a 'telomerase activity', All 'templates for synthesis of G-rich strand of telomere DNA activity' are 'molecular functions'
 |ExtractedFrom=http://purl.org/obo/owl/gene_ontology_edit
 |ReengineeredFrom=http://purl.org/obo/owl/gene_ontology_edit

@@ Line 1: / Line 1: @@
 {{Content_OP_Proposal_toolbar}}
 {{Graphical representation
 |ImageName=Gotop.jpg
@@ Line 9: / Line 10: @@
 |Domain=Biology
 |CompetencyQuestion=What are the possible most general supertypes for any type from the gene-related domain?, What entity is part of another entity in the gene-related domain?
 |ReusableOWLBuildingBlock=http://www.ontologydesignpatterns.org/cp/owl/gotop.owl
 |Consequences=It allows to categorize gene-related types into three main types.
@@ Line 33: / Line 35: @@
 |HasElement=partOf
 }}
 This pattern is peculiar to the biomolecular domain, where types of entities, rather than specific instances, are the main focus of interest. As a result, the Gene Ontology, based on this top-level categories, is a huge TBox.
 [[Submissions:PartOf| Part of]] can have this pattern as a specialization, if the three gene-related categories are considered as owl:subClassOf [[Submissions:PartOf/Entity| Entity]].
-{{Reviews about me}}{{Modeling issues about me}}
+{{Scenarios about me}}

@@ Line 4: / Line 4: @@
 }}
 {{Content OP Proposal Template
-|SubmittedBy=User:AldoGangemi
+|SubmittedBy=AldoGangemi
 |Name=Gene Ontology Top Level
 |Intent=To represent types of gene-related entities and their parts.